Andropogoneae Species
Michelle C. Stitzer
2024-12-19
Pogonatherum paniceum
Assembly is haploid, and the genome is diploid. It has a haploid genome size of 800 Mb, and has 10 haploid chromosomes.
Species herbarium records
Herbarium records of Pogonatherum paniceum from AuBuchon-Elder et al 2022 are plotted with black points, The sampled individual this genome was generated from is shown in a colored point. The green background shows the biogeographic ranges of all Andropogoneae species in AuBuchon-Elder et al 2022.
Highlighted Figure 1
Figure 1 from the main text, with Pogonatherum paniceum
highlighted with colored points.
Highlighted Figure 2
Figure 2 from the main text, with Pogonatherum paniceum
highlighted with colored points.
Dotplot of Pogonatherum paniceum vs. Paspalum vaginatum.
Like dotplots shown in Figure 3 of the main text, this shows syntenic blocks in Pogonatherum paniceum along the y-axis, vs P. vaginatum on the x-axis. As Pogonatherum paniceum is a diploid with a haploid, assembly, we expect 1 paths for any x-axis position.
Fractionation of Pogonatherum paniceum
Like plots shown in Figure 4 of the main text, this shows proportion of retained genes in Pogonatherum paniceum along the y-axis, vs P. vaginatum chromosomes on the x-axis. As Pogonatherum paniceum is a diploid with a haploid, assembly, we expect 1 lines for each subgenome.
Highlighted Figure 5
Figure 1 from the main text, with Pogonatherum paniceum highlighted with colored points or lines.